
   20-Dec-2020 16:08:10 +0100

rootdir = ..\201125_DoreenBob_HumanBlood4\
sampleName = H08_8nlps_RT
measNums = 10 1 2 3 4 5 6 7 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 621 cell sequences
cell traces covers the whole channel: 449 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 29
write results (420 cells):
----------
----------
420 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 277 cell sequences
cell traces covers the whole channel: 211 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 10
write results (201 cells):
----------
----------
201 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 575 cell sequences
cell traces covers the whole channel: 438 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 16
write results (422 cells):
----------
----------
422 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 531 cell sequences
cell traces covers the whole channel: 398 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 29
write results (369 cells):
----------
----------
369 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 549 cell sequences
cell traces covers the whole channel: 404 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 32
write results (372 cells):
----------
----------
372 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 494 cell sequences
cell traces covers the whole channel: 363 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 29
write results (334 cells):
----------
----------
334 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 458 cell sequences
cell traces covers the whole channel: 314 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 22
write results (292 cells):
----------
----------
292 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 378 cell sequences
cell traces covers the whole channel: 260 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 19
write results (241 cells):
----------
----------
241 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 458 cell sequences
cell traces covers the whole channel: 322 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 25
write results (297 cells):
----------
----------
297 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 459 cell sequences
cell traces covers the whole channel: 336 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 21
write results (315 cells):
----------
----------
315 cells written
measurement: ..\201125_DoreenBob_HumanBlood4\H08_8nlps_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	621	449	420	420
1	277	211	201	201
2	575	438	422	422
3	531	398	369	369
4	549	404	372	372
5	494	363	334	334
6	458	314	292	292
7	378	260	241	241
8	458	322	297	297
9	459	336	315	315

   9-Mar-2022 23:12:16 +0100

rootdir = ..\201125_DoreenBob_HumanBlood4\
sampleName = 201125_H08_8nlps_RT
measNums = 10 1 2 3 4 5 6 7 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 621 cell sequences
cell traces covers the whole channel: 449 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 29
write results (420 cells):
----------
----------
420 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 277 cell sequences
cell traces covers the whole channel: 211 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 10
write results (201 cells):
----------
----------
201 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 575 cell sequences
cell traces covers the whole channel: 438 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 16
write results (422 cells):
----------
----------
422 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 531 cell sequences
cell traces covers the whole channel: 398 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 29
write results (369 cells):
----------
----------
369 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 549 cell sequences
cell traces covers the whole channel: 404 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 32
write results (372 cells):
----------
----------
372 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 494 cell sequences
cell traces covers the whole channel: 363 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 29
write results (334 cells):
----------
----------
334 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 458 cell sequences
cell traces covers the whole channel: 314 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 22
write results (292 cells):
----------
----------
292 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 378 cell sequences
cell traces covers the whole channel: 260 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 19
write results (241 cells):
----------
----------
241 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 458 cell sequences
cell traces covers the whole channel: 322 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 25
write results (297 cells):
----------
----------
297 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 459 cell sequences
cell traces covers the whole channel: 336 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 21
write results (315 cells):
----------
----------
315 cells written
measurement: ..\201125_DoreenBob_HumanBlood4\201125_H08_8nlps_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	621	449	420	420
1	277	211	201	201
2	575	438	422	422
3	531	398	369	369
4	549	404	372	372
5	494	363	334	334
6	458	314	292	292
7	378	260	241	241
8	458	322	297	297
9	459	336	315	315
